STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP09046.1LSU ribosomal protein L25P. (218 aa)    
Predicted Functional Partners:
SDO04403.1
Small subunit ribosomal protein S15.
  
 0.998
SDP17838.1
Small subunit ribosomal protein S9.
   
 
 0.998
SDP17871.1
LSU ribosomal protein L13P.
   
 
 0.998
SDP24728.1
SSU ribosomal protein S2P.
  
 
 0.998
SDP62552.1
SSU ribosomal protein S6P.
 
 
 0.998
SDP65004.1
SSU ribosomal protein S10P.
   
 
 0.998
SDP67135.1
LSU ribosomal protein L10P.
   
 
 0.998
SDP67169.1
Large subunit ribosomal protein L1.
   
 
 0.998
SDP67191.1
LSU ribosomal protein L11P.
   
 
 0.998
SDP62635.1
LSU ribosomal protein L9P.
 
 
 0.997
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.