Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO00754.1 | SDO23282.1 | SAMN04488061_0020 | SAMN04488061_0640 | Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family. | Glycosyltransferase involved in cell wall bisynthesis. | 0.433 |
SDO00754.1 | SDP09812.1 | SAMN04488061_0020 | SAMN04488061_2181 | Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family. | Transcriptional regulator, TetR family. | 0.771 |
SDO23282.1 | SDO00754.1 | SAMN04488061_0640 | SAMN04488061_0020 | Glycosyltransferase involved in cell wall bisynthesis. | Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family. | 0.433 |
SDO23282.1 | SDP09812.1 | SAMN04488061_0640 | SAMN04488061_2181 | Glycosyltransferase involved in cell wall bisynthesis. | Transcriptional regulator, TetR family. | 0.485 |
SDO23282.1 | SDP28913.1 | SAMN04488061_0640 | SAMN04488061_2732 | Glycosyltransferase involved in cell wall bisynthesis. | Hypothetical protein. | 0.768 |
SDO30857.1 | SDO65757.1 | SAMN04488061_0852 | SAMN04488061_1321 | TIGR02302 family protein. | Protein of unknown function. | 0.762 |
SDO30857.1 | SDO68085.1 | SAMN04488061_0852 | SAMN04488061_1377 | TIGR02302 family protein. | N-terminal double-transmembrane domain-containing protein. | 0.775 |
SDO30857.1 | SDP09812.1 | SAMN04488061_0852 | SAMN04488061_2181 | TIGR02302 family protein. | Transcriptional regulator, TetR family. | 0.499 |
SDO39540.1 | SDP09812.1 | SAMN04488061_1078 | SAMN04488061_2181 | L-erythro-3-methylmalyl-CoA dehydratase. | Transcriptional regulator, TetR family. | 0.544 |
SDO65757.1 | SDO30857.1 | SAMN04488061_1321 | SAMN04488061_0852 | Protein of unknown function. | TIGR02302 family protein. | 0.762 |
SDO65757.1 | SDO68085.1 | SAMN04488061_1321 | SAMN04488061_1377 | Protein of unknown function. | N-terminal double-transmembrane domain-containing protein. | 0.714 |
SDO65757.1 | SDP09680.1 | SAMN04488061_1321 | SAMN04488061_2178 | Protein of unknown function. | Hypothetical protein. | 0.556 |
SDO65757.1 | SDP09812.1 | SAMN04488061_1321 | SAMN04488061_2181 | Protein of unknown function. | Transcriptional regulator, TetR family. | 0.535 |
SDO68085.1 | SDO30857.1 | SAMN04488061_1377 | SAMN04488061_0852 | N-terminal double-transmembrane domain-containing protein. | TIGR02302 family protein. | 0.775 |
SDO68085.1 | SDO65757.1 | SAMN04488061_1377 | SAMN04488061_1321 | N-terminal double-transmembrane domain-containing protein. | Protein of unknown function. | 0.714 |
SDO68085.1 | SDP09812.1 | SAMN04488061_1377 | SAMN04488061_2181 | N-terminal double-transmembrane domain-containing protein. | Transcriptional regulator, TetR family. | 0.472 |
SDP09680.1 | SDO65757.1 | SAMN04488061_2178 | SAMN04488061_1321 | Hypothetical protein. | Protein of unknown function. | 0.556 |
SDP09680.1 | SDP09719.1 | SAMN04488061_2178 | SAMN04488061_2179 | Hypothetical protein. | Pyrroline-5-carboxylate reductase; Manually curated. | 0.738 |
SDP09680.1 | SDP09770.1 | SAMN04488061_2178 | SAMN04488061_2180 | Hypothetical protein. | Arsenate reductase. | 0.463 |
SDP09680.1 | SDP09812.1 | SAMN04488061_2178 | SAMN04488061_2181 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.553 |
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