Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO16600.1 | SDO17435.1 | SAMN04488061_0459 | SAMN04488061_0482 | Na+/proline symporter. | Two-component system, OmpR family, sensor histidine kinase ChvG. | 0.821 |
SDO16600.1 | SDO17626.1 | SAMN04488061_0459 | SAMN04488061_0487 | Na+/proline symporter. | PAS domain-containing protein. | 0.881 |
SDO16600.1 | SDO32000.1 | SAMN04488061_0459 | SAMN04488061_0882 | Na+/proline symporter. | Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR. | 0.886 |
SDO16600.1 | SDO36043.1 | SAMN04488061_0459 | SAMN04488061_0989 | Na+/proline symporter. | Multi-sensor hybrid histidine kinase. | 0.999 |
SDO16600.1 | SDO39392.1 | SAMN04488061_0459 | SAMN04488061_1074 | Na+/proline symporter. | MHYT domain-containing protein, NO-binding membrane sensor. | 0.999 |
SDO16600.1 | SDO45443.1 | SAMN04488061_0459 | SAMN04488061_1221 | Na+/proline symporter. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
SDO16600.1 | SDO75955.1 | SAMN04488061_0459 | SAMN04488061_1582 | Na+/proline symporter. | Histidine phosphotransferase ChpT. | 0.771 |
SDO16600.1 | SDP12821.1 | SAMN04488061_0459 | SAMN04488061_2267 | Na+/proline symporter. | Cell cycle transcriptional regulator CtrA. | 0.978 |
SDO16600.1 | SDP44189.1 | SAMN04488061_0459 | SAMN04488061_3007 | Na+/proline symporter. | Signal transduction histidine kinase. | 0.999 |
SDO16600.1 | SDP51445.1 | SAMN04488061_0459 | SAMN04488061_3250 | Na+/proline symporter. | Two-component system, cell cycle sensor histidine kinase and response regulator CckA. | 0.999 |
SDO17435.1 | SDO16600.1 | SAMN04488061_0482 | SAMN04488061_0459 | Two-component system, OmpR family, sensor histidine kinase ChvG. | Na+/proline symporter. | 0.821 |
SDO17435.1 | SDO17626.1 | SAMN04488061_0482 | SAMN04488061_0487 | Two-component system, OmpR family, sensor histidine kinase ChvG. | PAS domain-containing protein. | 0.564 |
SDO17435.1 | SDO32000.1 | SAMN04488061_0482 | SAMN04488061_0882 | Two-component system, OmpR family, sensor histidine kinase ChvG. | Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR. | 0.612 |
SDO17435.1 | SDO36043.1 | SAMN04488061_0482 | SAMN04488061_0989 | Two-component system, OmpR family, sensor histidine kinase ChvG. | Multi-sensor hybrid histidine kinase. | 0.776 |
SDO17435.1 | SDO39392.1 | SAMN04488061_0482 | SAMN04488061_1074 | Two-component system, OmpR family, sensor histidine kinase ChvG. | MHYT domain-containing protein, NO-binding membrane sensor. | 0.806 |
SDO17435.1 | SDO45443.1 | SAMN04488061_0482 | SAMN04488061_1221 | Two-component system, OmpR family, sensor histidine kinase ChvG. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.958 |
SDO17435.1 | SDO75955.1 | SAMN04488061_0482 | SAMN04488061_1582 | Two-component system, OmpR family, sensor histidine kinase ChvG. | Histidine phosphotransferase ChpT. | 0.590 |
SDO17435.1 | SDP12821.1 | SAMN04488061_0482 | SAMN04488061_2267 | Two-component system, OmpR family, sensor histidine kinase ChvG. | Cell cycle transcriptional regulator CtrA. | 0.844 |
SDO17435.1 | SDP44189.1 | SAMN04488061_0482 | SAMN04488061_3007 | Two-component system, OmpR family, sensor histidine kinase ChvG. | Signal transduction histidine kinase. | 0.862 |
SDO17435.1 | SDP51445.1 | SAMN04488061_0482 | SAMN04488061_3250 | Two-component system, OmpR family, sensor histidine kinase ChvG. | Two-component system, cell cycle sensor histidine kinase and response regulator CckA. | 0.756 |
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