STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP13843.1DNA-binding transcriptional regulator, MarR family. (169 aa)    
Predicted Functional Partners:
SDO93266.1
Flagellar biosynthetic protein FliP.
   
    0.773
SDO15951.1
Hypothetical protein.
  
     0.649
SDO65328.1
DNA processing protein.
   
    0.630
SDO10856.1
Protein of unknown function.
  
     0.619
SDO93503.1
Flagella basal body P-ring formation protein FlgA.
  
    0.593
SDO94562.1
Flagellar hook-associated protein 1 FlgK.
  
    0.589
SDO37022.1
HemY protein.
  
     0.578
SDP55906.1
comF family protein.
  
    0.549
SDO90541.1
Cytochrome c.
   
 
  0.541
SDO40602.1
Hypothetical protein.
  
     0.533
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.