STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP14555.1Dihydroxy-acid dehydratase. (574 aa)    
Predicted Functional Partners:
SDP50197.1
Ketol-acid reductoisomerase.
 
 
 0.996
SDP09982.1
Branched-chain amino acid aminotransferase.
  
 0.983
SDP50323.1
2-isopropylmalate synthase.
 
 
 0.982
SDP23007.1
Acetolactate synthase, large subunit.
 
 0.971
SDP49678.1
Threonine dehydratase.
 
  
 0.956
SDP23115.1
Acetolactate synthase, small subunit.
 
 0.945
SDO86525.1
Para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase.
  
 0.940
SDP22608.1
2-isopropylmalate synthase.
  
 
 0.937
SDP58371.1
3-isopropylmalate dehydrogenase.
 
  
 0.908
SDP62083.1
D-alanine aminotransferase apoenzyme.
  
 0.902
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.