STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP17136.1glutaryl-CoA dehydrogenase. (403 aa)    
Predicted Functional Partners:
SDO38067.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.985
SDP28068.1
Short chain enoyl-CoA hydratase.
 
 0.960
SDO38101.1
Electron transfer flavoprotein beta subunit.
 
 
 0.927
SDO32912.1
enoyl-CoA hydratase.
   
  0.870
SDO75035.1
Enoyl-CoA hydratase/carnithine racemase.
   
  0.870
SDO37467.1
N-methylglutamate dehydrogenase subunit C.
   
 0.823
SDO67421.1
L-2-hydroxyglutarate oxidase LhgO.
   
 
 0.821
SDO27755.1
Aminomethyltransferase.
   
  0.793
SDO42562.1
Aminomethyltransferase.
   
  0.793
SDP06660.1
Aminomethyltransferase.
   
  0.793
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.