STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP20652.1Cysteine synthase A. (349 aa)    
Predicted Functional Partners:
SDP29411.1
Serine O-acetyltransferase.
 
 0.992
SDO26155.1
NAD(P)H-dependent nitrite reductase flavoprotein subunit.
 
 
 0.944
SDO31387.1
O-succinylhomoserine sulfhydrylase.
 0.937
SDP44444.1
Cystathionine beta-lyase.
 0.932
SDP22551.1
cysteinyl-tRNA synthetase.
  
 0.931
SDO94972.1
Bifunctional enzyme CysN/CysC.
  
  
 0.926
SDP20624.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
 
 
 0.901
SDP29236.1
Methionine synthase (B12-dependent); Manually curated.
    
 0.852
SDP21699.1
O-acetylhomoserine sulfhydrylase.
 
 0.788
SDO17587.1
Adenosylhomocysteinase.
  
 0.774
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.