STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP25109.1acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase. (266 aa)    
Predicted Functional Partners:
SDP25077.1
3-hydroxyacyl-[acyl-carrier-protein] dehydratase.
 
 0.998
SDP25172.1
lipid-A-disaccharide synthase.
 
 
 0.994
SDO25748.1
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase.
0.975
SDP25044.1
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase.
0.973
SDO80534.1
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase.
 
  
 0.959
SDP25141.1
Hypothetical protein.
 
   
 0.913
SDP25013.1
Beta-barrel assembly machine subunit BamA.
 
  
 0.904
SDO04116.1
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase.
  
 
 0.890
SDO72102.1
3-deoxy-D-manno-octulosonic-acid transferase.
 
   
 0.885
SDO72145.1
lipid-A-disaccharide kinase.
 
   
 0.870
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.