STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP25996.1Sulfur-oxidizing protein SoxA. (277 aa)    
Predicted Functional Partners:
SDP42075.1
Sulfur-oxidizing protein SoxX.
 
 
 0.995
SDP25968.1
Sulfur-oxidizing protein SoxX.
 
  
  0.977
SDP20385.1
Nitric oxide reductase, NorC subunit apoprotein.
   
 0.964
SDP19891.1
Cytochrome c oxidase cbb3-type subunit 3.
  
 0.945
SDO90541.1
Cytochrome c.
 
  
 0.927
SDO91390.1
Hypothetical protein.
 
 
 0.923
SDO71672.1
Cytochrome c.
  
 
 0.905
SDO90617.1
Sulfate thiol esterase SoxB.
 
  
 0.884
SDO90667.1
Sulfur compound chelating protein SoxZ.
 
  
 0.868
SDP27885.1
Sulfur compound chelating protein SoxZ.
 
  
 0.867
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.