Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO01613.1 | SDO01761.1 | SAMN04488061_0046 | SAMN04488061_0050 | Hypothetical protein. | Hypothetical protein. | 0.557 |
SDO01613.1 | SDO36982.1 | SAMN04488061_0046 | SAMN04488061_1014 | Hypothetical protein. | Hypothetical protein. | 0.466 |
SDO01613.1 | SDP17419.1 | SAMN04488061_0046 | SAMN04488061_2396 | Hypothetical protein. | O-antigen ligase like membrane protein. | 0.719 |
SDO01613.1 | SDP17576.1 | SAMN04488061_0046 | SAMN04488061_2400 | Hypothetical protein. | Uncharacterized protein involved in exopolysaccharide biosynthesis. | 0.481 |
SDO01613.1 | SDP17611.1 | SAMN04488061_0046 | SAMN04488061_2401 | Hypothetical protein. | Polysaccharide deacetylase. | 0.583 |
SDO01613.1 | SDP26762.1 | SAMN04488061_0046 | SAMN04488061_2671 | Hypothetical protein. | Acetyltransferase involved in cellulose biosynthesis, CelD/BcsL family. | 0.535 |
SDO01613.1 | SDP26909.1 | SAMN04488061_0046 | SAMN04488061_2675 | Hypothetical protein. | Hypothetical protein. | 0.601 |
SDO01761.1 | SDO01613.1 | SAMN04488061_0050 | SAMN04488061_0046 | Hypothetical protein. | Hypothetical protein. | 0.557 |
SDO01761.1 | SDO30376.1 | SAMN04488061_0050 | SAMN04488061_0839 | Hypothetical protein. | Membrane protein involved in the export of O-antigen and teichoic acid. | 0.695 |
SDO01761.1 | SDO36982.1 | SAMN04488061_0050 | SAMN04488061_1014 | Hypothetical protein. | Hypothetical protein. | 0.604 |
SDO01761.1 | SDP17419.1 | SAMN04488061_0050 | SAMN04488061_2396 | Hypothetical protein. | O-antigen ligase like membrane protein. | 0.731 |
SDO01761.1 | SDP17576.1 | SAMN04488061_0050 | SAMN04488061_2400 | Hypothetical protein. | Uncharacterized protein involved in exopolysaccharide biosynthesis. | 0.933 |
SDO01761.1 | SDP17611.1 | SAMN04488061_0050 | SAMN04488061_2401 | Hypothetical protein. | Polysaccharide deacetylase. | 0.607 |
SDO01761.1 | SDP26762.1 | SAMN04488061_0050 | SAMN04488061_2671 | Hypothetical protein. | Acetyltransferase involved in cellulose biosynthesis, CelD/BcsL family. | 0.667 |
SDO30376.1 | SDO01761.1 | SAMN04488061_0839 | SAMN04488061_0050 | Membrane protein involved in the export of O-antigen and teichoic acid. | Hypothetical protein. | 0.695 |
SDO30376.1 | SDP17419.1 | SAMN04488061_0839 | SAMN04488061_2396 | Membrane protein involved in the export of O-antigen and teichoic acid. | O-antigen ligase like membrane protein. | 0.851 |
SDO30376.1 | SDP17576.1 | SAMN04488061_0839 | SAMN04488061_2400 | Membrane protein involved in the export of O-antigen and teichoic acid. | Uncharacterized protein involved in exopolysaccharide biosynthesis. | 0.907 |
SDO30376.1 | SDP17611.1 | SAMN04488061_0839 | SAMN04488061_2401 | Membrane protein involved in the export of O-antigen and teichoic acid. | Polysaccharide deacetylase. | 0.759 |
SDO30376.1 | SDP26762.1 | SAMN04488061_0839 | SAMN04488061_2671 | Membrane protein involved in the export of O-antigen and teichoic acid. | Acetyltransferase involved in cellulose biosynthesis, CelD/BcsL family. | 0.520 |
SDO30482.1 | SDO36982.1 | SAMN04488061_0842 | SAMN04488061_1014 | DNA helicase HerA, contains HAS-barrel and ATPase domains. | Hypothetical protein. | 0.542 |
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