STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP28653.1DNA primase. (644 aa)    
Predicted Functional Partners:
SDP62694.1
Replicative DNA helicase.
 0.999
SDP57640.1
RNAse PH.
    
 0.990
SDP28618.1
RNA polymerase primary sigma factor.
  
 0.986
SDO76533.1
GTP-binding protein.
   
  
 0.950
SDO79890.1
DNA helicase-2 / ATP-dependent DNA helicase PcrA.
 
 
 0.913
SDO11933.1
DNA polymerase-3 subunit gamma/tau.
  
 
 0.911
SDP58599.1
Helicase.
 
 
 0.911
SDP66059.1
UvrD/REP helicase N-terminal domain-containing protein.
 
 
 0.907
SDO24215.1
DNA polymerase I.
 
 
 0.899
SDO38598.1
Replication restart DNA helicase PriA.
     
 0.896
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.