STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP38530.14'-phosphopantetheinyl transferase. (242 aa)    
Predicted Functional Partners:
SDO14941.1
Non-ribosomal peptide synthetase terminal domain of unknown function.
 
 0.844
SDP62532.1
[Acyl-carrier-protein] S-malonyltransferase.
  
  
 0.798
SDO04168.1
3-oxoacyl-[acyl-carrier-protein] synthase-1.
  
 
 0.701
SDP28233.1
3-oxoacyl-[acyl-carrier-protein] synthase II.
  
 
 0.701
SDP62465.1
3-oxoacyl-[acyl-carrier-protein] synthase II.
  
 
 0.701
SDO00618.1
Enoyl-[acyl-carrier-protein] reductase [NADH].
  
    0.650
SDO04215.1
Enoyl-[acyl-carrier-protein] reductase [NADH].
  
    0.650
SDP16601.1
Enoyl-[acyl-carrier-protein] reductase [NADH].
  
    0.650
SDP38557.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
       0.601
SDO08774.1
Nitronate monooxygenase.
  
 
 0.598
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.