STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP39098.1Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family. (158 aa)    
Predicted Functional Partners:
SDP55196.1
ATP-dependent RNA helicase SUPV3L1/SUV3.
  
 
  0.985
SDP13359.1
Elongation factor G.
   
 0.971
SDP67015.1
Translation elongation factor 2 (EF-2/EF-G).
   
 0.971
SDP17871.1
LSU ribosomal protein L13P.
   
 0.969
SDP65022.1
LSU ribosomal protein L3P.
   
  0.962
SDP65187.1
SSU ribosomal protein S17P.
   
  0.960
SDO66681.1
Superfamily II DNA and RNA helicase.
 
 0.957
SDP22683.1
ATP-dependent RNA helicase RhlE.
 
 0.954
SDP41713.1
ATP-dependent RNA helicase DeaD.
 
 0.950
SDO82371.1
DnaJ domain-containing protein.
  
 
 0.945
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.