STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP40790.1Hypothetical protein. (236 aa)    
Predicted Functional Partners:
SDP40702.1
Hypothetical protein.
  
  
 0.797
SDP40820.1
Hypothetical protein.
       0.773
SDP40734.1
Hypothetical protein.
       0.752
SDP40762.1
Hypothetical protein.
       0.752
SDP40644.1
Phage major tail protein, TP901-1 family.
   
   0.700
SDP40518.1
Phage head-tail adaptor, putative, SPP1 family.
  
   0.682
SDP45729.1
Phage conserved hypothetical protein, phiE125 gp8 family.
   
   0.595
SDP45926.1
TIGR02217 family protein.
   
   0.595
SDP45961.1
Phage conserved hypothetical protein BR0599.
   
   0.595
SDP45779.1
Protein of unknown function.
   
   0.592
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.