STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP46741.1Undecaprenyl-diphosphatase. (249 aa)    
Predicted Functional Partners:
SDO02169.1
Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase.
   
 0.942
SDP21644.1
Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase.
   
 0.942
SDP65298.1
Large subunit ribosomal protein L6.
    
  0.928
SDO07841.1
Cytochrome P450.
   
 0.889
SDO82821.1
Cytochrome P450.
   
 0.889
SDO84841.1
F-type H+-transporting ATPase subunit c.
   
 0.886
SDO73159.1
fatty-acyl-CoA synthase.
    
 0.870
SDP28174.1
Long-chain acyl-CoA synthetase.
    
 0.870
SDP23468.1
DNA-directed RNA polymerase subunit omega.
    
   0.857
SDP46656.1
Diacylglycerol kinase family enzyme.
 
 
 0.849
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.