STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP47235.1Transcriptional regulator, BadM/Rrf2 family. (156 aa)    
Predicted Functional Partners:
SDO07961.1
Transcriptional regulator, BadM/Rrf2 family.
  
     0.774
SDO67071.1
Transcriptional regulator, BadM/Rrf2 family.
  
 
 0.774
SDP47196.1
Uncharacterized conserved protein YeaO, DUF488 family.
       0.752
SDP56509.1
Nitric oxide dioxygenase.
 
   
 0.730
SDP47258.1
Uncharacterized protein, possibly involved in tellurite resistance.
       0.567
SDO45443.1
Diguanylate cyclase (GGDEF) domain-containing protein.
     
 0.513
SDP47285.1
5,10-methenyltetrahydrofolate synthetase.
       0.447
SDO67110.1
Transcriptional regulator, BadM/Rrf2 family.
  
   
 0.421
SDP29709.1
NifU homolog involved in Fe-S cluster formation.
  
  
 0.406
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.