STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP47646.1mxaC protein. (335 aa)    
Predicted Functional Partners:
SDP47619.1
mxaA protein.
 
  
 0.985
SDP47698.1
mxaL protein.
 
  
 0.973
SDP47728.1
mxaD protein.
 
  
 0.968
SDP47535.1
Methanol dehydrogenase (cytochrome) small subunit.
 
  
  0.964
SDP47589.1
Protein of unknown function DUF58.
 
  
 0.960
SDP47674.1
mxaK protein.
 
  
  0.958
SDP47561.1
MoxR-like ATPase.
 
 
 0.957
SDP47509.1
Cytochrome cL apoprotein.
 
  
  0.955
SDP47476.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
  
  0.943
SDP47449.1
Methanol dehydrogenase (cytochrome) large subunit apoprotein.
 
  
  0.904
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.