STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP47728.1mxaD protein. (179 aa)    
Predicted Functional Partners:
SDP47698.1
mxaL protein.
  
 0.991
SDP47674.1
mxaK protein.
 
  
  0.970
SDP47619.1
mxaA protein.
 
  
 0.968
SDP47646.1
mxaC protein.
 
  
 0.968
SDP47535.1
Methanol dehydrogenase (cytochrome) small subunit.
 
  
  0.954
SDP47509.1
Cytochrome cL apoprotein.
 
  
  0.947
SDP47752.1
40-residue YVTN family beta-propeller repeat-containing protein.
 
  
  0.941
SDP47476.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
  
  0.939
SDP47449.1
Methanol dehydrogenase (cytochrome) large subunit apoprotein.
 
  
  0.909
SDP42507.1
Alcohol dehydrogenase (cytochrome c).
  
  
  0.887
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.