STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP49282.1Aspartyl protease family protein. (235 aa)    
Predicted Functional Partners:
SDP49318.1
Hypothetical protein; Manually curated.
       0.786
SDP49250.1
Aspartyl protease family protein.
 
    
0.583
SDP49356.1
Two-component system, cell cycle sensor histidine kinase PleC.
       0.569
SDO10856.1
Protein of unknown function.
  
     0.459
SDP22524.1
Protein of unknown function.
  
     0.444
SDP44866.1
Hypothetical protein.
  
     0.431
SDO71442.1
ATP phosphoribosyltransferase regulatory subunit.
  
     0.409
SDP45615.1
Large terminase phage packaging protein.
  
     0.404
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.