STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP56008.1Glutamate N-acetyltransferase. (415 aa)    
Predicted Functional Partners:
SDP59821.1
N-acetylglutamate kinase.
 
 0.999
SDO31571.1
acetylornithine/N-succinyldiaminopimelate aminotransferase.
 
 
 0.995
SDO31524.1
Ornithine carbamoyltransferase.
 
 
 0.993
SDP17759.1
N-acetyl-gamma-glutamyl-phosphate reductase.
 
 
 0.993
SDO30961.1
Argininosuccinate lyase.
 
 
 0.963
SDP58702.1
Argininosuccinate synthase.
 
  
 0.927
SDP28826.1
Carbamoyl-phosphate synthase large subunit.
  
 
 0.863
SDO25343.1
Imidazoleglycerol-phosphate dehydratase.
 
   
 0.800
SDO31451.1
Acetylornithine deacetylase.
     
 0.747
SDO10827.1
Histidinol dehydrogenase.
 
  
 0.729
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
Server load: low (24%) [HD]