STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP56204.1Acyl-CoA synthetase (NDP forming). (720 aa)    
Predicted Functional Partners:
SDO78695.1
Indolepyruvate ferredoxin oxidoreductase.
 
 
 0.873
SDO06196.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
     
 0.764
SDP56256.1
acetyl-CoA C-acetyltransferase.
  
 
  0.728
SDP56229.1
glutaryl-CoA dehydrogenase.
    
  0.716
SDP28068.1
Short chain enoyl-CoA hydratase.
  
 
  0.696
SDP56278.1
3-hydroxyacyl-CoA dehydrogenase.
    
  0.671
SDP47938.1
Sulfoacetaldehyde dehydrogenase.
 
  
 0.605
SDO36628.1
Acetyl-coenzyme A synthetase.
    
 0.581
SDO73084.1
propionyl-CoA synthetase.
    
 0.581
SDP51222.1
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
   
 0.581
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.