STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP56375.1Protein ImuB. (499 aa)    
Predicted Functional Partners:
SDP56400.1
Protein ImuA.
 
  
 0.998
SDO32574.1
DNA polymerase III, beta subunit.
   
 0.996
SDP56352.1
Error-prone DNA polymerase.
 
 
 0.996
SDP25317.1
Repressor LexA.
  
 0.990
SDP51468.1
Recombination protein RecA.
  
 0.974
SDO80841.1
Cell division protein FtsW.
   
 
 0.931
SDO24215.1
DNA polymerase I.
  
 0.919
SDP24695.1
DNA polymerase III, alpha subunit.
  
 
 0.917
SDP62921.1
DNA polymerase-3 subunit delta'.
   
 
 0.896
SDP11538.1
Bifunctional non-homologous end joining protein LigD.
  
 
 0.884
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.