Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO11299.1 | SDO70155.1 | SAMN04488061_0298 | SAMN04488061_1427 | Peptide deformylase. | Holliday junction endonuclease RuvC. | 0.644 |
SDO11299.1 | SDP57310.1 | SAMN04488061_0298 | SAMN04488061_3366 | Peptide deformylase. | Magnesium chelatase family protein. | 0.767 |
SDO65328.1 | SDP25275.1 | SAMN04488061_1310 | SAMN04488061_2634 | DNA processing protein. | Competence protein ComEC. | 0.841 |
SDO65328.1 | SDP55906.1 | SAMN04488061_1310 | SAMN04488061_3312 | DNA processing protein. | comF family protein. | 0.932 |
SDO65328.1 | SDP57310.1 | SAMN04488061_1310 | SAMN04488061_3366 | DNA processing protein. | Magnesium chelatase family protein. | 0.904 |
SDO65328.1 | SDP57360.1 | SAMN04488061_1310 | SAMN04488061_3368 | DNA processing protein. | Putative endonuclease. | 0.508 |
SDO70155.1 | SDO11299.1 | SAMN04488061_1427 | SAMN04488061_0298 | Holliday junction endonuclease RuvC. | Peptide deformylase. | 0.644 |
SDO70155.1 | SDP57310.1 | SAMN04488061_1427 | SAMN04488061_3366 | Holliday junction endonuclease RuvC. | Magnesium chelatase family protein. | 0.588 |
SDO93928.1 | SDP57310.1 | SAMN04488061_2047 | SAMN04488061_3366 | Flagellar basal-body rod protein FlgF. | Magnesium chelatase family protein. | 0.656 |
SDP25275.1 | SDO65328.1 | SAMN04488061_2634 | SAMN04488061_1310 | Competence protein ComEC. | DNA processing protein. | 0.841 |
SDP25275.1 | SDP55906.1 | SAMN04488061_2634 | SAMN04488061_3312 | Competence protein ComEC. | comF family protein. | 0.858 |
SDP25275.1 | SDP57310.1 | SAMN04488061_2634 | SAMN04488061_3366 | Competence protein ComEC. | Magnesium chelatase family protein. | 0.717 |
SDP55906.1 | SDO65328.1 | SAMN04488061_3312 | SAMN04488061_1310 | comF family protein. | DNA processing protein. | 0.932 |
SDP55906.1 | SDP25275.1 | SAMN04488061_3312 | SAMN04488061_2634 | comF family protein. | Competence protein ComEC. | 0.858 |
SDP55906.1 | SDP57310.1 | SAMN04488061_3312 | SAMN04488061_3366 | comF family protein. | Magnesium chelatase family protein. | 0.847 |
SDP55906.1 | SDP57360.1 | SAMN04488061_3312 | SAMN04488061_3368 | comF family protein. | Putative endonuclease. | 0.532 |
SDP57283.1 | SDP57310.1 | SAMN04488061_3365 | SAMN04488061_3366 | Ribosomal protein S18 acetylase RimI. | Magnesium chelatase family protein. | 0.490 |
SDP57310.1 | SDO11299.1 | SAMN04488061_3366 | SAMN04488061_0298 | Magnesium chelatase family protein. | Peptide deformylase. | 0.767 |
SDP57310.1 | SDO65328.1 | SAMN04488061_3366 | SAMN04488061_1310 | Magnesium chelatase family protein. | DNA processing protein. | 0.904 |
SDP57310.1 | SDO70155.1 | SAMN04488061_3366 | SAMN04488061_1427 | Magnesium chelatase family protein. | Holliday junction endonuclease RuvC. | 0.588 |
page 1 of 2