STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP57334.1Glutathione synthase. (316 aa)    
Predicted Functional Partners:
SDO71848.1
Glutamate--cysteine ligase.
    
 0.879
SDP50133.1
NADPH-glutathione reductase.
  
  
 0.817
SDP62238.1
Leucyl aminopeptidase.
   
 
 0.761
SDO12402.1
Leucyl aminopeptidase.
   
 
 0.753
SDP23074.1
Glutathione S-transferase.
  
  
 0.744
SDP58040.1
Glutathione S-transferase.
  
  
 0.739
SDO21582.1
Glutathione S-transferase.
  
  
  0.734
SDP46623.1
Aminopeptidase N.
    
 0.719
SDO12329.1
Glutathione S-transferase.
  
  
  0.714
SDO05921.1
Cation transport protein ChaC; Non-canonical start codon; manually curated.
     
 0.703
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.