STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP59777.1iron(III) transport system substrate-binding protein. (351 aa)    
Predicted Functional Partners:
SDO35477.1
iron(III) transport system permease protein.
 
 
 0.993
SDP14962.1
iron(III) transport system ATP-binding protein.
 
 
 0.959
SDO07920.1
Putative iron-regulated protein.
  
    0.867
SDO44672.1
Uncharacterized conserved protein, contains GH25 family domain.
   
    0.756
SDO70646.1
Chemotaxis protein MotB.
    
   0.647
SDO93317.1
Flagellar FliL protein.
    
   0.647
SDO29604.1
Iron complex transport system substrate-binding protein.
  
  
 0.588
SDP26356.1
Thioredoxin reductase (NADPH).
   
    0.549
SDP58988.1
Thioredoxin reductase (NADPH).
   
    0.549
SDO93049.1
Chemotaxis protein MotB.
    
   0.547
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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