STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP62350.14-hydroxythreonine-4-phosphate dehydrogenase. (365 aa)    
Predicted Functional Partners:
SDP62369.1
16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase.
 
  
 0.930
SDP23561.1
Pyridoxine 5-phosphate synthase.
 
  
 0.876
SDO69309.1
Phosphoserine aminotransferase apoenzyme.
     
 0.866
SDP62326.1
Periplasmic chaperone for outer membrane proteins SurA.
  
  
 0.848
SDO79539.1
Dihydrofolate reductase.
   
 0.782
SDP07175.1
Methanesulfonate monooxygenase reductase component.
    
  0.713
SDO32504.1
DNA gyrase subunit B.
 
      0.711
SDO85417.1
Threonine synthase.
    
  0.698
SDP14119.1
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II.
  
  
 0.545
SDP62302.1
LPS-assembly protein.
  
    0.522
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
Server load: low (26%) [HD]