STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP65060.1LSU ribosomal protein L23P. (97 aa)    
Predicted Functional Partners:
SDP17871.1
LSU ribosomal protein L13P.
  
 0.999
SDP24728.1
SSU ribosomal protein S2P.
  
 0.999
SDP51678.1
SSU ribosomal protein S4P.
  
 0.999
SDP59112.1
Large subunit ribosomal protein L19.
  
 
 0.999
SDP62635.1
LSU ribosomal protein L9P.
  
 
 0.999
SDP65004.1
SSU ribosomal protein S10P.
 
 0.999
SDP65022.1
LSU ribosomal protein L3P.
 
 0.999
SDP65039.1
LSU ribosomal protein L4P.
 0.999
SDP65076.1
LSU ribosomal protein L2P.
 
 0.999
SDP65095.1
SSU ribosomal protein S19P.
 
 0.999
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.