STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BIW11_14150DNA-binding protein RFX5-like. (291 aa)    
Predicted Functional Partners:
BIW11_10301
Serine/threonine-protein kinase atr-like; Belongs to the PI3/PI4-kinase family.
    
 
 0.820
BIW11_00569
Tonsoku protein-like.
    
 0.779
BIW11_03332
Ankyrin repeat family A protein 2-like.
   
 0.657
BIW11_12256
Kinase D-interacting substrate of 220 kDa-like.
    
 0.643
BIW11_09385
TATA-binding protein-associated factor 172-like.
    
   0.626
BIW11_07107
TATA-binding protein-associated factor-like.
    
   0.626
BIW11_05806
Protein polybromo-1-like.
   
   0.556
BIW11_01313
Cell division cycle protein 16-like.
    
 
 0.525
BIW11_02470
Peptidase C50 domain-containing protein.
    
   0.523
BIW11_01466
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like.
    
   0.514
Your Current Organism:
Tropilaelaps mercedesae
NCBI taxonomy Id: 418985
Other names: T. mercedesae
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