STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB82134.1dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (289 aa)    
Predicted Functional Partners:
KXB78123.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
 0.998
KXB81973.1
KEGG: pdn:HMPREF9137_1300 1.4e-184 rffG; dTDP-glucose 4,6-dehydratase K01710; Psort location: Cytoplasmic, score: 8.96; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.965
KXB82135.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.838
KXB75702.1
NAD dependent epimerase/dehydratase family protein; KEGG: sgo:SGO_2016 1.7e-71 nucleotide sugar dehydratase K01710; Psort location: Cytoplasmic, score: 9.26.
  
 0.819
KXB82137.1
ROK family protein; KEGG: pdn:HMPREF9137_1347 3.0e-143 putative glucokinase; K00845 glucokinase; Psort location: Cytoplasmic, score: 9.26.
    
 0.808
KXB77801.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.796
KXB82136.1
Translocator protein, LysE family; KEGG: apb:SAR116_2438 0.0045 export protein (LysE); Psort location: CytoplasmicMembrane, score: 10.00.
       0.785
fcl
NAD dependent epimerase/dehydratase family protein; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
  
 0.779
KXB80393.1
NAD dependent epimerase/dehydratase family protein; KEGG: bfs:BF4355 1.5e-102 UDP-glucose 4-epimerase K01784; Psort location: Cytoplasmic, score: 9.97.
  
 0.774
KXB78055.1
KEGG: pdn:HMPREF9137_0844 1.2e-134 NAD dependent epimerase/dehydratase family protein; Psort location: Cytoplasmic, score: 8.96.
  
 0.774
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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