STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB81954.1KEGG: pmz:HMPREF0659_A6869 4.2e-281 putative Prolyl endopeptidase; K01322 prolyl oligopeptidase; Psort location: Periplasmic, score: 9.76. (705 aa)    
Predicted Functional Partners:
KXB81953.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; Belongs to the UPF0246 family.
       0.849
fcl
NAD dependent epimerase/dehydratase family protein; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
       0.849
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
       0.791
KXB74213.1
KEGG: pmz:HMPREF0659_A5571 0. peptidase, S9A/B/C family, catalytic domain protein K01278.
  
   
 0.520
KXB74250.1
KEGG: pmz:HMPREF0659_A6994 0. peptidase, S9A/B/C family, catalytic domain protein.
  
   
 0.415
KXB77501.1
KEGG: pmz:HMPREF0659_A6751 0. peptidase, S9A/B/C family, catalytic domain protein K01278; Psort location: Cytoplasmic, score: 8.96.
  
   
 0.403
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.