STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB81964.1Hypothetical protein. (132 aa)    
Predicted Functional Partners:
KXB81963.1
Hypothetical protein.
       0.849
KXB81961.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.819
KXB81962.1
ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
       0.819
KXB81965.1
KEGG: pmz:HMPREF0659_A5640 2.7e-142 glycosyltransferase, group 2 family protein; Psort location: CytoplasmicMembrane, score: 7.88.
  
    0.715
KXB81960.1
KEGG: pmz:HMPREF0659_A5645 2.0e-297 putative Oligopeptidase A; K01284 peptidyl-dipeptidase Dcp; Psort location: Cytoplasmic, score: 9.97.
       0.701
KXB81966.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.697
KXB81959.1
KEGG: pru:PRU_0197 4.8e-58 cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein; K01493 dCMP deaminase; Psort location: Cytoplasmic, score: 8.96.
       0.647
KXB81958.1
Peptidase, S41 family; KEGG: pdn:HMPREF9137_1247 3.8e-232 peptidase, S41 family K03797; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the peptidase S41A family.
       0.620
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.