STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB81740.1Hypothetical protein. (150 aa)    
Predicted Functional Partners:
KXB81741.1
Hypothetical protein.
 
     0.961
KXB81742.1
Sigma-70 region 2; KEGG: ccm:Ccan_05890 1.2e-15 putative RNA polymerase sigma factor rfaY K03088; Psort location: Cytoplasmic, score: 8.96; Belongs to the sigma-70 factor family. ECF subfamily.
       0.765
KXB77991.1
Hypothetical protein; KEGG: tin:Tint_2201 1.8e-05 DNA topoisomerase; Psort location: Cytoplasmic, score: 8.96.
  
     0.696
KXB76283.1
Hypothetical protein; KEGG: tin:Tint_2201 1.5e-05 DNA topoisomerase; Psort location: Cytoplasmic, score: 8.96.
  
     0.695
KXB75600.1
Relaxase/mobilization nuclease domain protein; KEGG: tin:Tint_2201 2.3e-09 DNA topoisomerase; Psort location: Cytoplasmic, score: 8.96.
  
     0.688
KXB75537.1
Relaxase/mobilization nuclease domain protein; KEGG: tin:Tint_2201 4.7e-11 DNA topoisomerase; Psort location: Cytoplasmic, score: 8.96.
  
     0.685
KXB81743.1
Hypothetical protein.
       0.677
KXB77116.1
Relaxase/mobilization nuclease domain protein; KEGG: tin:Tint_2201 8.6e-09 DNA topoisomerase; Psort location: Cytoplasmic, score: 8.96.
  
     0.674
KXB81744.1
Hypothetical protein.
       0.637
KXB78134.1
Hypothetical protein; KEGG: rcu:RCOM_0229730 1.8e-53 beta-glucosidase, putative; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.631
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.