STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB81748.1Hypothetical protein; KEGG: ssr:SALIVB_2089 5.4e-27 tyrosyl-tRNA synthetase; Psort location: CytoplasmicMembrane, score: 10.00. (303 aa)    
Predicted Functional Partners:
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.543
KXB81747.1
Tsp45I type II restriction enzyme.
       0.521
KXB81749.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.499
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
       0.486
KXB81746.1
KEGG: cch:Cag_1392 2.1e-34 type II DNA modification methyltransferase K00571.
       0.461
KXB81750.1
ABC transporter, ATP-binding protein; KEGG: fte:Fluta_2314 6.6e-29 gliding motility protein GldA K09687; Psort location: CytoplasmicMembrane, score: 7.88.
       0.439
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.