STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB81581.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (177 aa)    
Predicted Functional Partners:
KXB81582.1
ABC-2 type transporter; KEGG: apb:SAR116_0895 0.0070 ABC protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.847
KXB81580.1
Hypothetical protein.
       0.667
KXB81579.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
       0.534
KXB81583.1
KEGG: bqy:MUS_0693 2.3e-28 nodI1; Nod factor export ATP-binding protein I K09687; Psort location: CytoplasmicMembrane, score: 9.82.
       0.521
KXB81584.1
SagB-type dehydrogenase domain protein; KEGG: bce:BC1248 7.5e-11 NADH oxidase; Psort location: Cytoplasmic, score: 8.96.
       0.521
KXB81585.1
YcaO-like family protein; Psort location: Cytoplasmic, score: 8.96.
       0.521
KXB81586.1
Hypothetical protein; KEGG: cby:CLM_0574 0.00014 bacteriocin biosynthesis cyclodehydratase; Psort location: Cytoplasmic, score: 8.96.
       0.511
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.