Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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Textmining
[Homology]
Score
KXB81582.1ABC-2 type transporter; KEGG: apb:SAR116_0895 0.0070 ABC protein; Psort location: CytoplasmicMembrane, score: 10.00. (240 aa)    
Predicted Functional Partners:
KXB81581.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.817
KXB81585.1
YcaO-like family protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.793
KXB81584.1
SagB-type dehydrogenase domain protein; KEGG: bce:BC1248 7.5e-11 NADH oxidase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.786
KXB81583.1
KEGG: bqy:MUS_0693 2.3e-28 nodI1; Nod factor export ATP-binding protein I K09687; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.779
KXB81580.1
Hypothetical protein.
 
     0.709
KXB81586.1
Hypothetical protein; KEGG: cby:CLM_0574 0.00014 bacteriocin biosynthesis cyclodehydratase; Psort location: Cytoplasmic, score: 8.96.
 
     0.634
KXB75584.1
KEGG: ccm:Ccan_20920 6.7e-52 ABC transporter ATP-binding protein yhcG; Psort location: Cytoplasmic, score: 9.12.
  
 
 0.573
KXB81750.1
ABC transporter, ATP-binding protein; KEGG: fte:Fluta_2314 6.6e-29 gliding motility protein GldA K09687; Psort location: CytoplasmicMembrane, score: 7.88.
  
 
 0.547
KXB81579.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
       0.539
KXB79140.1
Nitroreductase family protein; KEGG: bfr:BF3826 5.7e-78 oxidoreductase; K00540; Belongs to the flavin oxidoreductase frp family.
  
  
 0.460
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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