STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB81590.1KEGG: tvo:TVN1212 0.0072 hypothetical protein; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase; Psort location: OuterMembrane, score: 9.49. (757 aa)    
Predicted Functional Partners:
KXB75621.1
Hypothetical protein.
  
 
   0.814
KXB81589.1
Radical SAM domain protein; KEGG: vfi:VF_A0208 1.0e-06 arylsulfatase regulator (Fe-S oxidoreductase) K06871; Psort location: Cytoplasmic, score: 8.96.
       0.793
KXB81591.1
ABC transporter, ATP-binding protein; KEGG: osp:Odosp_0369 0. Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
       0.780
KXB81592.1
Hypothetical protein.
       0.745
KXB80115.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.591
KXB79712.1
Site-specific recombinase, phage integrase family; KEGG: pfe:PSF113_1062 4.4e-10 xerD; XerD protein K04763; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
  
     0.590
KXB80132.1
TonB-dependent receptor; KEGG: hip:CGSHiEE_01810 2.4e-07 bcp; TonB K03832; Psort location: Periplasmic, score: 9.83.
  
   0.564
KXB78993.1
TonB-dependent receptor.
  
   0.564
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
   0.564
KXB75596.1
Hypothetical protein.
    
   0.560
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.