STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB81560.1Hypothetical protein. (64 aa)    
Predicted Functional Partners:
KXB78783.1
Heavy metal efflux pump, CzcA family; KEGG: dat:HRM2_00450 1.4e-145 rndA; protein RndA K07787; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.781
KXB81591.1
ABC transporter, ATP-binding protein; KEGG: osp:Odosp_0369 0. Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.764
KXB77511.1
Psort location: OuterMembrane, score: 9.93.
  
 0.708
KXB74226.1
Efflux transporter, outer membrane factor lipoprotein, NodT family; KEGG: pfe:PSF113_1856 1.3e-19 outer membrane pyoverdine eflux protein; Psort location: OuterMembrane, score: 9.92.
  
 0.708
KXB74010.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
 0.708
KXB79387.1
Peptidase, C39 family; KEGG: osp:Odosp_0369 5.0e-143 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.553
KXB77872.1
ABC transporter, ATP-binding protein; KEGG: osp:Odosp_0903 4.6e-211 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.553
KXB77855.1
ABC transporter, ATP-binding protein; KEGG: osp:Odosp_0369 1.2e-45 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 7.88.
  
  0.553
KXB77856.1
ABC transporter transmembrane region; KEGG: fte:Fluta_4016 5.4e-130 peptide-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 9.99.
  
  0.553
KXB76903.1
Hypothetical protein; KEGG: osp:Odosp_0369 4.2e-98 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 9.82.
  
  0.553
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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