Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB81445.1ISPg7, transposase family protein; KEGG: xop:PXO_04446 5.7e-34 tRNA nucleotidyltransferase; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme); Psort location: Cytoplasmic, score: 8.96. (338 aa)    
Predicted Functional Partners:
KXB74641.1
Hypothetical protein; KEGG: efc:EFAU004_00580 5.3e-06 ISEfa7, transposase; Psort location: Cytoplasmic, score: 8.96.
  
     0.666
KXB75067.1
Hypothetical protein.
  
     0.644
KXB77362.1
Hypothetical protein.
 
     0.634
KXB77904.1
Hypothetical protein.
  
     0.631
KXB76507.1
KEGG: efu:HMPREF0351_12109 2.7e-05 TetR/AcrR family transcriptional regulator.
  
     0.566
KXB77617.1
P-loop domain protein, KAP family; KEGG: cbk:CLL_A3035 0.00012 endopeptidase O; K07386 putative endopeptidase; Psort location: Cytoplasmic, score: 8.96.
  
     0.509
KXB77785.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
   
 0.498
KXB79583.1
Hypothetical protein; KEGG: hcm:HCD_04450 2.4e-72 putative site-specific DNA-methyltransferase; K00558 DNA (cytosine-5-)-methyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
     0.472
KXB81264.1
Transposase, IS4 family; Psort location: Cytoplasmic, score: 8.96.
  
     0.435
KXB81222.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52.
  
     0.435
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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