KXB81379.1 protein (Prevotella amnii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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co-expression

Genomic Predictions

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Your Current Organism:

Prevotella amnii

NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KXB81377.1	KXB81379.1	HMPREF1860_00151	HMPREF1860_00153	Histidine triad domain protein; KEGG: ccm:Ccan_20690 4.0e-31 HIT-like protein K02503; Psort location: Cytoplasmic, score: 9.97.	Hypothetical protein.	0.723
KXB81377.1	greA	HMPREF1860_00151	HMPREF1860_00152	Histidine triad domain protein; KEGG: ccm:Ccan_20690 4.0e-31 HIT-like protein K02503; Psort location: Cytoplasmic, score: 9.97.	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.786
KXB81379.1	KXB81377.1	HMPREF1860_00153	HMPREF1860_00151	Hypothetical protein.	Histidine triad domain protein; KEGG: ccm:Ccan_20690 4.0e-31 HIT-like protein K02503; Psort location: Cytoplasmic, score: 9.97.	0.723
KXB81379.1	greA	HMPREF1860_00153	HMPREF1860_00152	Hypothetical protein.	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.773
greA	KXB81377.1	HMPREF1860_00152	HMPREF1860_00151	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Histidine triad domain protein; KEGG: ccm:Ccan_20690 4.0e-31 HIT-like protein K02503; Psort location: Cytoplasmic, score: 9.97.	0.786
greA	KXB81379.1	HMPREF1860_00152	HMPREF1860_00153	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Hypothetical protein.	0.773