STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB81383.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.86. (416 aa)    
Predicted Functional Partners:
KXB79115.1
Hypothetical protein.
  
     0.553
KXB78747.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.522
KXB78470.1
Hypothetical protein.
  
     0.502
KXB74402.1
Hypothetical protein; KEGG: afd:Alfi_3036 4.3e-34 G:T/U mismatch-specific DNA glycosylase; Psort location: Cytoplasmic, score: 8.96.
  
     0.500
KXB80105.1
KEGG: pmz:HMPREF0659_A5634 0. nrdD; anaerobic ribonucleoside-triphosphate reductase K00527; Psort location: Cytoplasmic, score: 9.97.
  
     0.462
KXB78899.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.460
KXB75990.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.450
KXB80383.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.443
KXB81382.1
Hypothetical protein; KEGG: apb:SAR116_1414 4.2e-43 integral membrane protein K06890; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the BI1 family.
       0.433
KXB80139.1
Tetratricopeptide repeat protein; KEGG: tet:TTHERM_00391570 3.9e-06 DNA polymerase family B containing protein K02350; Psort location: OuterMembrane, score: 9.52.
  
     0.409
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.