STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB81391.1comF family protein; KEGG: zga:zobellia_1422 4.5e-30 phosphoribosyltransferase; Psort location: Cytoplasmic, score: 9.97. (234 aa)    
Predicted Functional Partners:
KXB80435.1
DNA protecting protein DprA; KEGG: ccm:Ccan_01460 9.4e-62 protein smf K04096; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.892
KXB81978.1
ComEC/Rec2-like protein; KEGG: apb:SAR116_0501 8.6e-19 DNA uptake protein ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.870
KXB81393.1
KEGG: pmz:HMPREF0659_A6293 1.4e-83 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493; Psort location: Cytoplasmic, score: 9.97.
  
    0.850
recX
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
       0.849
KXB76237.1
Mg chelatase-like protein; KEGG: ccm:Ccan_16640 1.5e-166 competence protein comM K07391; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.813
KXB81389.1
Hypothetical protein.
       0.642
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
       0.642
KXB81394.1
KEGG: pit:PIN17_A0657 5.5e-105 ribD; riboflavin biosynthesis protein RibD K11752; Psort location: Cytoplasmic, score: 9.97.
       0.616
KXB77487.1
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
    0.590
apt
Putative adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.542
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.