Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB81404.1Peptidase, M28 family; KEGG: pmz:HMPREF0659_A5088 2.8e-133 peptidase, M28 family. (343 aa)    
Predicted Functional Partners:
KXB81405.1
Renal dipeptidase family protein; KEGG: pru:PRU_2864 6.8e-194 amma-glutamyl hydrolase family peptidase; Psort location: Cytoplasmic, score: 8.96.
 
     0.789
KXB81406.1
Putative regulatory protein AsnC; KEGG: pfe:PSF113_5648 3.7e-12 asnC family transcriptional regulator K05800; Psort location: Cytoplasmic, score: 9.97.
       0.663
KXB78225.1
Hypothetical protein.
 
     0.569
KXB78242.1
KEGG: pdn:HMPREF9137_0969 0. peptidase, S8/S53 family; Psort location: Extracellular, score: 9.72; Belongs to the peptidase S8 family.
     
 0.467
KXB75733.1
KEGG: pdn:HMPREF9137_0249 3.3e-194 PPIC-type PPIASE domain-containing protein; K03771 peptidyl-prolyl cis-trans isomerase SurA.
  
     0.402
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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