STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB81327.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (341 aa)    
Predicted Functional Partners:
KXB81324.1
DNA binding domain, excisionase family.
 
     0.857
KXB81321.1
DNA binding domain, excisionase family; Psort location: Cytoplasmic, score: 8.96.
 
     0.790
KXB81329.1
Beta-lactamase; KEGG: bth:BT_4507 4.3e-50 beta-lactamase; K01467 beta-lactamase; Psort location: Periplasmic, score: 9.23.
  
     0.740
KXB81322.1
Site-specific recombinase, phage integrase family; KEGG: pfe:PSF113_1062 2.8e-08 xerD; XerD protein K04763; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
 
     0.731
KXB78030.1
Pyruvate synthase; KEGG: pdn:HMPREF9137_1524 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
  
   0.710
KXB81326.1
Hypothetical protein; KEGG: oih:OB0209 0.0046 positive control sigma-like factor K03088.
       0.704
KXB74745.1
Hypothetical protein; KEGG: pmz:HMPREF0659_A7234 4.4e-71 phage lysozyme.
  
     0.662
KXB76633.1
Hypothetical protein; KEGG: pmz:HMPREF0659_A7234 3.5e-62 phage lysozyme.
  
     0.659
KXB79469.1
Hypothetical protein.
  
  0.656
KXB79119.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
  0.656
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.