STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB81264.1Transposase, IS4 family; Psort location: Cytoplasmic, score: 8.96. (360 aa)    
Predicted Functional Partners:
KXB78740.1
Hypothetical protein; KEGG: pmh:P9215_00001 0.0050 dnaN; DNA polymerase III subunit beta K02338; Psort location: OuterMembrane, score: 9.52.
  
     0.739
KXB81222.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52.
  
     0.681
KXB77870.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.548
KXB75690.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.532
KXB77785.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.484
KXB74211.1
Hypothetical protein; KEGG: dmu:Desmu_1037 0.0084 peptidase S26B, signal peptidase; K13280 signal peptidase, endoplasmic reticulum-type; Psort location: Cytoplasmic, score: 8.96.
  
     0.482
KXB77249.1
Hypothetical protein; KEGG: ebe:B21_03481 1.6e-05 insI-1; IS30 transposase, N-ter fragment.
  
     0.454
KXB81445.1
ISPg7, transposase family protein; KEGG: xop:PXO_04446 5.7e-34 tRNA nucleotidyltransferase; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme); Psort location: Cytoplasmic, score: 8.96.
  
     0.435
KXB77364.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.430
KXB80106.1
KEGG: pit:PIN17_0377 3.3e-50 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068.
  
     0.409
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.