Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB81221.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (294 aa)    
Predicted Functional Partners:
KXB81220.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB77868.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.658
KXB75692.1
Hypothetical protein; KEGG: osp:Odosp_0369 3.3e-50 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.536
KXB81222.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52.
       0.487
KXB81223.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.487
KXB74461.1
ABC transporter transmembrane region; KEGG: osp:Odosp_0369 2.0e-265 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.439
KXB78732.1
Hypothetical protein.
  
     0.437
KXB81591.1
ABC transporter, ATP-binding protein; KEGG: osp:Odosp_0369 0. Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.429
KXB77856.1
ABC transporter transmembrane region; KEGG: fte:Fluta_4016 5.4e-130 peptide-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.426
KXB77872.1
ABC transporter, ATP-binding protein; KEGG: osp:Odosp_0903 4.6e-211 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.425
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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