Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXB75596.1 | KXB78470.1 | HMPREF1860_01814 | HMPREF1860_00972 | Hypothetical protein. | Hypothetical protein. | 0.677 |
KXB75596.1 | KXB81222.1 | HMPREF1860_01814 | HMPREF1860_00237 | Hypothetical protein. | TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52. | 0.644 |
KXB75621.1 | KXB78470.1 | HMPREF1860_01783 | HMPREF1860_00972 | Hypothetical protein. | Hypothetical protein. | 0.560 |
KXB75621.1 | KXB81222.1 | HMPREF1860_01783 | HMPREF1860_00237 | Hypothetical protein. | TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52. | 0.673 |
KXB77618.1 | KXB77785.1 | HMPREF1860_01305 | HMPREF1860_01239 | Fic family protein; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | 0.427 |
KXB77618.1 | KXB81222.1 | HMPREF1860_01305 | HMPREF1860_00237 | Fic family protein; Psort location: Cytoplasmic, score: 8.96. | TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52. | 0.609 |
KXB77785.1 | KXB77618.1 | HMPREF1860_01239 | HMPREF1860_01305 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | Fic family protein; Psort location: Cytoplasmic, score: 8.96. | 0.427 |
KXB77785.1 | KXB81222.1 | HMPREF1860_01239 | HMPREF1860_00237 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52. | 0.687 |
KXB77785.1 | KXB81264.1 | HMPREF1860_01239 | HMPREF1860_00234 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | Transposase, IS4 family; Psort location: Cytoplasmic, score: 8.96. | 0.484 |
KXB78470.1 | KXB75596.1 | HMPREF1860_00972 | HMPREF1860_01814 | Hypothetical protein. | Hypothetical protein. | 0.677 |
KXB78470.1 | KXB75621.1 | HMPREF1860_00972 | HMPREF1860_01783 | Hypothetical protein. | Hypothetical protein. | 0.560 |
KXB78470.1 | KXB81222.1 | HMPREF1860_00972 | HMPREF1860_00237 | Hypothetical protein. | TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52. | 0.572 |
KXB78993.1 | KXB81222.1 | HMPREF1860_00749 | HMPREF1860_00237 | TonB-dependent receptor. | TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52. | 0.613 |
KXB80132.1 | KXB81222.1 | HMPREF1860_00420 | HMPREF1860_00237 | TonB-dependent receptor; KEGG: hip:CGSHiEE_01810 2.4e-07 bcp; TonB K03832; Psort location: Periplasmic, score: 9.83. | TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52. | 0.642 |
KXB80142.1 | KXB81222.1 | HMPREF1860_00430 | HMPREF1860_00237 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. | TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52. | 0.568 |
KXB81222.1 | KXB75596.1 | HMPREF1860_00237 | HMPREF1860_01814 | TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52. | Hypothetical protein. | 0.644 |
KXB81222.1 | KXB75621.1 | HMPREF1860_00237 | HMPREF1860_01783 | TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52. | Hypothetical protein. | 0.673 |
KXB81222.1 | KXB77618.1 | HMPREF1860_00237 | HMPREF1860_01305 | TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52. | Fic family protein; Psort location: Cytoplasmic, score: 8.96. | 0.609 |
KXB81222.1 | KXB77785.1 | HMPREF1860_00237 | HMPREF1860_01239 | TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | 0.687 |
KXB81222.1 | KXB78470.1 | HMPREF1860_00237 | HMPREF1860_00972 | TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52. | Hypothetical protein. | 0.572 |
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