Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB81222.1TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52. (781 aa)    
Predicted Functional Partners:
KXB81223.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.773
KXB77785.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.687
KXB81264.1
Transposase, IS4 family; Psort location: Cytoplasmic, score: 8.96.
  
     0.681
KXB77618.1
Fic family protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.609
KXB78470.1
Hypothetical protein.
  
     0.572
KXB80142.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.568
KXB81224.1
Hypothetical protein; KEGG: rho:RHOM_08580 0.00027 DNA topoisomerase; K03169 DNA topoisomerase III; Psort location: Cytoplasmic, score: 8.96.
       0.543
KXB78473.1
TonB-dependent receptor; KEGG: ccv:CCV52592_1977 2.2e-10 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 9.52.
  
  
  0.517
KXB75686.1
Hypothetical protein.
  
 
   0.514
KXB80132.1
TonB-dependent receptor; KEGG: hip:CGSHiEE_01810 2.4e-07 bcp; TonB K03832; Psort location: Periplasmic, score: 9.83.
  
   0.504
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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