STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB80835.1Pectinesterase inhibitor domain protein. (200 aa)    
Predicted Functional Partners:
KXB80836.1
Hypothetical protein.
       0.765
KXB75588.1
Hypothetical protein.
 
     0.720
KXB80597.1
Hypothetical protein.
  
     0.697
KXB81366.1
Hypothetical protein.
    
 
 0.684
KXB78297.1
Hypothetical protein.
    
 
 0.684
KXB80837.1
Xaa-His dipeptidase; KEGG: pdn:HMPREF9137_0071 3.8e-200 pepD_1; Xaa-His dipeptidase; Psort location: Cytoplasmic, score: 8.96.
       0.667
KXB75622.1
SusD family protein.
    
 
 0.648
KXB80088.1
OmpA family protein; KEGG: hhy:Halhy_4875 0.00037 OmpA/MotB domain-containing protein; K02275 cytochrome c oxidase subunit II; Psort location: OuterMembrane, score: 10.00.
  
 
 0.595
KXB78743.1
OmpA family protein; Psort location: OuterMembrane, score: 9.93.
  
 
 0.595
KXB76242.1
OmpA family protein; KEGG: pfe:PSF113_0716 0.0018 yfiB; protein YfiB.
  
 
 0.595
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.