STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB80597.1Hypothetical protein. (204 aa)    
Predicted Functional Partners:
KXB80596.1
Putative stage III sporulation protein E; KEGG: apb:SAR116_1808 5.5e-89 DNA segregation ATPase FtsK/SpoIIIE K03466; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.754
KXB79903.1
Efflux ABC transporter, permease protein; KEGG: pfe:PSF113_3968 1.2e-29 lolC; protein LolC K09808; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 
 0.748
KXB80397.1
Hypothetical protein; KEGG: fsi:Flexsi_0864 0.0028 diacylglycerol kinase; K00901 diacylglycerol kinase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.732
KXB80607.1
Fibronectin type III domain protein; KEGG: hya:HY04AAS1_0906 0.0037 N-acetylmuramoyl-L-alanine amidase K01448.
  
 
   0.727
lolD
ABC transporter, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
   
 
 0.726
KXB77797.1
Efflux ABC transporter, permease protein; KEGG: pfe:PSF113_3968 7.7e-24 lolC; protein LolC K09808; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.698
KXB80835.1
Pectinesterase inhibitor domain protein.
  
     0.697
KXB79143.1
KEGG: pdn:HMPREF9137_2497 1.4e-140 N-acetylmuramoyl-L-alanine amidase K01448.
    
   0.684
KXB80595.1
3'-5' exonuclease; KEGG: pdn:HMPREF9137_2385 1.4e-65 3'-5' exonuclease; Psort location: Cytoplasmic, score: 8.96.
 
    0.679
KXB74998.1
Hypothetical protein.
  
 
 
 0.667
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.