STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB80389.1Hypothetical protein. (689 aa)    
Predicted Functional Partners:
KXB80388.1
Heptosyltransferase; KEGG: gfo:GFO_3278 1.0e-57 RfaQ-like lipopolysaccharide core biosynthesis glycosyl transferase K01043; Psort location: Cytoplasmic, score: 8.96.
       0.795
KXB80390.1
GH3 auxin-responsive promoter; KEGG: ccm:Ccan_18100 5.6e-135 CF4-like protein; Psort location: Cytoplasmic, score: 8.96.
       0.789
KXB79956.1
Outer membrane insertion signal domain protein; Psort location: OuterMembrane, score: 9.52.
  
    0.771
KXB80092.1
Hypothetical protein; KEGG: pkn:PKH_011660 0.0030 mannose-6-phosphate isomerase.
  
     0.746
KXB74293.1
Outer membrane protein, OMP85 family.
  
     0.742
KXB81389.1
Hypothetical protein.
  
     0.741
KXB79957.1
Hypothetical protein.
  
     0.736
KXB79960.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.727
KXB80145.1
Outer membrane assembly lipoprotein YfiO.
  
     0.723
KXB74153.1
Permease, YjgP/YjgQ family; KEGG: hiq:CGSHiGG_02270 0.0013 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K07091; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.723
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.