STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB80390.1GH3 auxin-responsive promoter; KEGG: ccm:Ccan_18100 5.6e-135 CF4-like protein; Psort location: Cytoplasmic, score: 8.96. (503 aa)    
Predicted Functional Partners:
KXB80389.1
Hypothetical protein.
       0.789
KXB80419.1
uroporphyrinogen-III synthase; KEGG: pdn:HMPREF9137_0433 2.5e-107 hemD; uroporphyrinogen-III synthase K01719; Psort location: Cytoplasmic, score: 8.96.
  
     0.714
KXB77476.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.704
KXB80388.1
Heptosyltransferase; KEGG: gfo:GFO_3278 1.0e-57 RfaQ-like lipopolysaccharide core biosynthesis glycosyl transferase K01043; Psort location: Cytoplasmic, score: 8.96.
       0.700
KXB80146.1
Hypothetical protein.
 
     0.681
KXB77800.1
Chain length determinant protein; KEGG: bsa:Bacsa_0238 4.6e-156 capsular exopolysaccharide family protein; Psort location: CytoplasmicMembrane, score: 9.82.
    
  0.608
KXB74244.1
Type I restriction enzyme HsdR protein; KEGG: nth:Nther_0809 3.8e-05 LexA repressor; Psort location: Cytoplasmic, score: 8.96.
  
     0.598
KXB80387.1
Hypothetical protein.
 
  
  0.584
KXB78450.1
Hypothetical protein; KEGG: tsc:TSC_c18630 3.2e-13 ydiI; esterase YdiI.
  
 
 0.560
KXB77815.1
Putative FeS assembly SUF system protein; KEGG: lru:HMPREF0538_22161 4.8e-19 yitW2; N-6 adenine-specific DNA methylase YitW; Psort location: Cytoplasmic, score: 8.96.
    
 0.555
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.